Accession
MI0047710
Description
Echinops telfairi
ete-mir-199-1 precursor miRNA
Sequence
uggaagcuuugggagauccugcuccgucgcCCCAGUGUUCAGACUACCUGUUCaggacaaugccguuguACAGUAGUCUGCACAUUGGUUAgacugggcaaggcagagcaacgccgcgcag
.((..((((((......(((((((.(((...(((((((.((((((((.(((.((((......))..)).))))))))))).)))))))...))).)))).)))))))))....))......
.((..((((((......(((((((.(((...(((((((.((((((((.(((.((((......))..)).))))))))))).)))))))...))).)))).)))))))))....))......
Structure
-----u --aa ggagau - c gcC U C U -- ac
gg gcuuug ccu gcuc guc CCAGUGU CAGACUAC UGU Ca gg a
|| |||||| ||| |||| ||| ||||||| |||||||| ||| || ||
cc cgagac gga cggg cag GGUUACA GUCUGAUG ACA gu cc a
gacgcg gcaa ------ a u AUU C - u ug gu
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
ref|NW_004558726.1|: 26675803-26675923 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ete-mir-199-1
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ete-miR-199-5p
| Accession | MIMAT0073766 |
| Description | Echinops telfairi ete-miR-199-5p mature miRNA |
| Sequence | 31 - CCCAGUGUUCAGACUACCUGUUC - 53 |
| Evidence | not_experimental |
Mature ete-miR-199-3p
| Accession | MIMAT0073765 |
| Description | Echinops telfairi ete-miR-199-3p mature miRNA |
| Sequence | 70 - ACAGUAGUCUGCACAUUGGUUA - 91 |
| Evidence | not_experimental |
References
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