miRBase entry: ete-mir-194b

Stem-loop ete-mir-194b


Accession
MI0047713
Description
Echinops telfairi ete-mir-194b precursor miRNA


Sequence


ggaccgagccucugauggguucccguccccUGUAACAGCAACUCCAUGUGGAGgugcucgcugguuCCAGUGGAGUUGCUGUUGCCUGgggcgagggccacggcacaccgcacagagg
........((((((.(((((((.((((((..((((((((((((((((.(((((.(.......).)))))))))))))))))))))..)))))).))))).(((....)))))))))))

Structure
ggaccgag      a  -----------     c      cU                G     g gc 
        ccucug ug           gguuc cguccc  GUAACAGCAACUCCAU UGGAG u  u
        |||||| ||           ||||| ||||||  |||||||||||||||| ||||| |  c
        ggagac ac           ccggg gcgggG  CGUUGUCGUUGAGGUG ACCuu g  g
--------      -  gccacacggca     a      UC                -     g uc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
ref|NW_004558777.1|: 3027919-3028036 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from ete-mir-194b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ete-miR-194b-5p

Accession MIMAT0073772
Description Echinops telfairi ete-miR-194b-5p mature miRNA
Sequence 31 - UGUAACAGCAACUCCAUGUGGAG - 53
Evidence not_experimental

Mature ete-miR-194b-3p

Accession MIMAT0073773
Description Echinops telfairi ete-miR-194b-3p mature miRNA
Sequence 67 - CCAGUGGAGUUGCUGUUGCCUG - 88
Evidence not_experimental

References