miRBase entry: ete-mir-496

Stem-loop ete-mir-496


Accession
MI0047741
Description
Echinops telfairi ete-mir-496 precursor miRNA


Sequence


ggcacacagucaguccgguacuugaauggaGGUUGUCCAUGGUGUGUUCAUUuuauuuaugaUGAGUAUUACAUGGCCAAUCUCcuuucaguacuaaauucgucaugggaaaca
(((.....))).....((((((.(((.((((((((.(((((..(((((((((........)))))))))..))))).)))))))).)))))))))...(((......)))....

Structure
---ggcacacagucagucc      u   u        U     GU         uua 
                   gguacu gaa ggaGGUUG CCAUG  GUGUUCAUU   u
                   |||||| ||| |||||||| |||||  |||||||||    
                   ucauga cuu cCUCUAAC GGUAC  UAUGAGUag   u
acaaaggguacugcuuaaa      -   u        C     AU         uau 


Annotation confidence Not enough data
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Genome context
ref|NW_004558705.1|: 82282423-82282536 [-]
Clustered miRNAs
12 other miRNAs are < 10 kb from ete-mir-496
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ete-miR-496-5p

Accession MIMAT0073827
Description Echinops telfairi ete-miR-496-5p mature miRNA
Sequence 31 - GGUUGUCCAUGGUGUGUUCAUU - 52
Evidence not_experimental

Mature ete-miR-496-3p

Accession MIMAT0073826
Description Echinops telfairi ete-miR-496-3p mature miRNA
Sequence 63 - UGAGUAUUACAUGGCCAAUCUC - 84
Evidence not_experimental

References