Accession
MI0047749
Description
Echinops telfairi
ete-mir-539 precursor miRNA
Sequence
ucuccagccgggucgcuguuuccuacuugaGGAGAAAUUACCCUUGGUGUGuuggcuuuaucacgacaaauCAUCCAAGGACAAUUUCUUGUUgaguaucaaauccugccucagcgauuugua
........(((((((((((((..(((((((.((((((((..(((((((((((((.........)))))...)).))))))..)))))))).)))))))..)))........))))))))))..
........(((((((((((((..(((((((.((((((((..(((((((((((((.........)))))...)).))))))..)))))))).)))))))..)))........))))))))))..
Structure
ucuccagc -------- cc G AC - --- gcu
cgggucgcug uuu uacuuga GAGAAAUU CCUUGG UG UGuug u
|||||||||| ||| ||||||| |||||||| |||||| || ||||| u
guuuagcgac aaa augagUU UUCUUUAA GGAACC AC acagc a
------au uccguccu cu G CA U uaa acu
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
ref|NW_004558705.1|: 82294217-82294339 [-]
Clustered miRNAs
12 other miRNAs are < 10 kb from ete-mir-539
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ete-miR-539-5p
| Accession | MIMAT0073843 |
| Description | Echinops telfairi ete-miR-539-5p mature miRNA |
| Sequence | 31 - GGAGAAAUUACCCUUGGUGUG - 51 |
| Evidence | not_experimental |
Mature ete-miR-539-3p
| Accession | MIMAT0073842 |
| Description | Echinops telfairi ete-miR-539-3p mature miRNA |
| Sequence | 72 - CAUCCAAGGACAAUUUCUUGUU - 93 |
| Evidence | not_experimental |
References
|
|
