Accession
MI0047754
Description
Echinops telfairi
ete-mir-543 precursor miRNA
Sequence
gacggcgcgucgacaugcgguacuuaaugaGAAGUUGCCCGCGUUUUUUUCGcuuaauuugugacgAAACAUUCGCGGUGCACUUCUUuuucaguauccaauucugcguugaggaugc
..(((((((..((..((.((((((.((.(((((((.(((((((..(.((((((.........).))))).)..))))).))))))))).)).))))))))..))))))))).......
..(((((((..((..((.((((((.((.(((((((.(((((((..(.((((((.........).))))).)..))))).))))))))).)).))))))))..))))))))).......
Structure
-----ga uc ca c u u U - UU U - uua
cggcgcg ga ug gguacu aa gaGAAGU GC CCGCG U UUUCG c a
||||||| || || |||||| || ||||||| || ||||| | ||||| | u
guugcgu cu ac cuauga uu UUCUUCA CG GGCGC A AAAgc g u
cguagga -- ua - c u - U UU C a ugu
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
ref|NW_004558705.1|: 82306162-82306279 [-]
Clustered miRNAs
15 other miRNAs are < 10 kb from ete-mir-543
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ete-miR-543-5p
| Accession | MIMAT0073853 |
| Description | Echinops telfairi ete-miR-543-5p mature miRNA |
| Sequence | 31 - GAAGUUGCCCGCGUUUUUUUCG - 52 |
| Evidence | not_experimental |
Mature ete-miR-543-3p
| Accession | MIMAT0073852 |
| Description | Echinops telfairi ete-miR-543-3p mature miRNA |
| Sequence | 67 - AAACAUUCGCGGUGCACUUCUU - 88 |
| Evidence | not_experimental |
References
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