miRBase entry: ete-mir-96

Stem-loop ete-mir-96


Accession
MI0047809
Description
Echinops telfairi ete-mir-96 precursor miRNA


Sequence


ggccacacuggcaccaccugcuuggccgauUUUGGCACUAGCACAUUUUUGCUugugucucuccgcucugagCAAUCAUGUGCAGUGCCAAUAUgggagaagcgggcagagcgucaaguccccc
.((((...))))....(((((((..((.((.((((((((.((((((..(((((((((......)))...))))))..)))))))))))))).)).))..)))))))..................

Structure
--ggccacacuggcacca       gg  g  U        A      UU      ---   uc 
                  ccugcuu  cc au UUGGCACU GCACAU  UUGCUu   gug  u
                  |||||||  || || |||||||| ||||||  ||||||   |||   
                  gggcgaa  gg UA AACCGUGA CGUGUA  AACgag   cgc  c
cccccugaacugcgagac       ga  g  U        -      CU      ucu   cu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
ref|NW_004558729.1|: 22675103-22675226 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from ete-mir-96
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ete-miR-96-5p

Accession MIMAT0073953
Description Echinops telfairi ete-miR-96-5p mature miRNA
Sequence 31 - UUUGGCACUAGCACAUUUUUGCU - 53
Evidence not_experimental

Mature ete-miR-96-3p

Accession MIMAT0073954
Description Echinops telfairi ete-miR-96-3p mature miRNA
Sequence 73 - CAAUCAUGUGCAGUGCCAAUAU - 94
Evidence not_experimental

References