Stem-loop ete-mir-30d

Accession

MI0047826

Description

Echinops telfairi ete-mir-30d precursor miRNA

Sequence

gugagcagagcccggccgaguguccgcucaUGUAAACAUCCUACACUCAGCUgucgggcacggagggCUGGGAGGCGGAUGUUUACGUCagcugccucggcaugucagccggccacgca
(((.((.(.((.((((((((.((..(((.((((((((((((..(.(((((((.((.......)).))))))).)..)))))))))))).))).)))))))).))...))).)))))...

Structure

---   a  a a  --c  -      u  cc   c            UA A       g  gg 
   gug gc g gc   cg gccgag gu  gcu aUGUAAACAUCC  C CUCAGCU uc  g
   ||| || | ||   || |||||| ||  ||| ||||||||||||  | ||||||| ||  c
   cac cg c cg   gu cggcuc cg  cga UGCAUUUGUAGG  G GGGUCgg ag  a
acg   -  g -  acu  a      -  -u   C            CG A       g  gc 

Annotation confidence Not enough data

Genome context

ref|NW_004558703.1|: 6799895-6800013 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ete-mir-30d

Mature ete-miR-30d-5p

• Accession: MIMAT0073986
• Description: Echinops telfairi ete-miR-30d-5p mature miRNA
• Sequence: 31 - UGUAAACAUCCUACACUCAGCU - 52
• Evidence: not_experimental

Mature ete-miR-30d-3p

• Accession: MIMAT0073987
• Description: Echinops telfairi ete-miR-30d-3p mature miRNA
• Sequence: 68 - CUGGGAGGCGGAUGUUUACGUC - 89
• Evidence: not_experimental

References