Stem-loop ete-mir-30c

Accession

MI0047827

Description

Echinops telfairi ete-mir-30c precursor miRNA

Sequence

ucuccguucuuucugggcagucuuugcuacUGUAAACAUCCUUGACUGGAAGCUguaagguguucagaggagCUUUCAGUCGGAUGUUUACAGCggcaggcugccacagucaucccuggcugcg
...............((((((((..(((.((((((((((((..(((((((((((.(...(....)...).))))))))))))))))))))))).))))))))))).((((((....))))))..

Structure

----ucuccguucuuucug        uu   a            UU           g aag u 
                   ggcagucu  gcu cUGUAAACAUCC  GACUGGAAGCU u   g g
                   ||||||||  ||| ||||||||||||  ||||||||||| |   |  
                   ccgucgga  cgg GACAUUUGUAGG  CUGACUUUCga g   c u
gcgucggucccuacugaca        --   C            --           g aga u 

Annotation confidence Not enough data

Genome context

ref|NW_004558721.1|: 2682132-2682255 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from ete-mir-30c

Mature ete-miR-30c-5p

• Accession: MIMAT0073988
• Description: Echinops telfairi ete-miR-30c-5p mature miRNA
• Sequence: 31 - UGUAAACAUCCUUGACUGGAAGCU - 54
• Evidence: not_experimental

Mature ete-miR-30c-3p

• Accession: MIMAT0073989
• Description: Echinops telfairi ete-miR-30c-3p mature miRNA
• Sequence: 73 - CUUUCAGUCGGAUGUUUACAGC - 94
• Evidence: not_experimental

References