Stem-loop ete-mir-17c

Accession

MI0047851

Description

Echinops telfairi ete-mir-17c precursor miRNA

Sequence

ggugugugugagugacagcuucugcagcacUAAAGUGCUUACAGUGCAGGUAGugugucguuaucuACUGCACUAUGAGCACUUACAGUgcugccagcuguaggacuccagcuucggcu
(.((.((..((((.((((((...((((((((.(((((((((.(((((((.(((.(((....))))))))))))).)))))))))..)))))))).))))))...))))..))..)).).

Structure

- g  -u  gu    --g      ucu        -A         C       G   u   u 
 g ug  gu  gagu   acagcu   gcagcacU  AAGUGCUUA AGUGCAG UAG gug c
 | ||  ||  ||||   ||||||   ||||||||  ||||||||| ||||||| ||| |||  
 c gc  cg  cuca   ugucga   cgucgUGA  UUCACGAGU UCACGUC Auc uau g
u g  uu  ac    gga      --c        CA         A       -   -   u 

Annotation confidence Not enough data

Genome context

ref|NW_004558740.1|: 5284377-5284495 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from ete-mir-17c

Mature ete-miR-17c-5p

• Accession: MIMAT0074032
• Description: Echinops telfairi ete-miR-17c-5p mature miRNA
• Sequence: 31 - UAAAGUGCUUACAGUGCAGGUAG - 53
• Evidence: not_experimental

Mature ete-miR-17c-3p

• Accession: MIMAT0074033
• Description: Echinops telfairi ete-miR-17c-3p mature miRNA
• Sequence: 67 - ACUGCACUAUGAGCACUUACAGU - 89
• Evidence: not_experimental

References