miRBase entry: ete-mir-16b

Stem-loop ete-mir-16b


Accession
MI0047859
Description
Echinops telfairi ete-mir-16b precursor miRNA


Sequence


uuuggauggacugacauacuuguuccgcucUAGCAGCACGUAAAUAUUGGCGUaguggaauaaauauuaaacACCAAUAUUAUUGUGCUGCUUUAgugugacaggguuauagcaacuauuuuauc
...((((((.(((..(..((((((.((((..(((((((((..((((((((.((((((.......))))..)).))))))))..)))))))))..)))).))))))..).)))...))))))....

Structure
-uuu      --a   ac ua      c    cU         UA        C  --    ga 
    ggaugg   cug  a  cuuguu cgcu  AGCAGCACG  AAUAUUGG GU  agug  a
    ||||||   |||  |  |||||| ||||  |||||||||  |||||||| ||  ||||  u
    uuuauc   gau  u  ggacag gugA  UCGUCGUGU  UUAUAACC ca  uuau  a
cuau      aac   -a ug      u    UU         UA        A  aa    aa 


Annotation confidence Not enough data
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Genome context
ref|NW_004558718.1|: 44226191-44226315 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from ete-mir-16b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ete-miR-16b-5p

Accession MIMAT0074048
Description Echinops telfairi ete-miR-16b-5p mature miRNA
Sequence 31 - UAGCAGCACGUAAAUAUUGGCGU - 53
Evidence not_experimental

Mature ete-miR-16b-3p

Accession MIMAT0074049
Description Echinops telfairi ete-miR-16b-3p mature miRNA
Sequence 73 - ACCAAUAUUAUUGUGCUGCUUUA - 95
Evidence not_experimental

References