miRBase entry: ete-mir-497

Stem-loop ete-mir-497


Accession
MI0047861
Description
Echinops telfairi ete-mir-497 precursor miRNA


Sequence


cucucaacccacccaguccugcccccgcccCAGCAGCACACUGUGGUUUGCAcggcauuguggccacgucCAAACCACACUGUGGUGUUAGAGCGAGggugggggaggcuccgcugaggccu
...........(((((((((.((((((((((((((.((((.(((((((((.(((((......)))..)).))))))))).)))).)))).....).))))))))))))....)))).))...

Structure
cucucaaccca  -    ----   g         - -----    G    C         C  --   au 
           cc cagu    ccu cccccgccc C     AGCA CACA UGUGGUUUG Ac  ggc  u
           || ||||    ||| ||||||||| |     |||| |||| ||||||||| ||  |||   
           gg gucg    gga ggggguggG G     UUGU GUGU ACACCAAAC ug  ccg  g
--------ucc  a    ccuc   -         A CGAGA    G    C         c  ca   gu 


Annotation confidence Not enough data
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Genome context
ref|NW_004558770.1|: 486349-486470 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from ete-mir-497
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ete-miR-497-5p

Accession MIMAT0074052
Description Echinops telfairi ete-miR-497-5p mature miRNA
Sequence 31 - CAGCAGCACACUGUGGUUUGCA - 52
Evidence not_experimental

Mature ete-miR-497-3p

Accession MIMAT0074053
Description Echinops telfairi ete-miR-497-3p mature miRNA
Sequence 71 - CAAACCACACUGUGGUGUUAGAGCGAG - 97
Evidence not_experimental

References