miRBase entry: ete-mir-322

Stem-loop ete-mir-322


Accession
MI0047862
Description
Echinops telfairi ete-mir-322 precursor miRNA


Sequence


cccccucccuucguggaccccggggggaugCAGCAGCAAUUCAUGUUUUGGAguguuguacaaaguuCAAAACGUGAAGCGCUGCUACAcccccucgcgggaaaaguaggaggaggggu
.((((((((((..(...((((((((((.((.((((((..(((((((((((((.(.........).)))))))))))))..)))))).)).))))))).)))...)..))).))))))).

Structure
c       -   cg gga   -       a  C      AA             g guu 
 ccccucc cuu  u   ccc cgggggg ug AGCAGC  UUCAUGUUUUGGA u   g
 ||||||| |||  |   ||| ||||||| || ||||||  ||||||||||||| |   u
 ggggagg gga  a   ggg gcucccc AC UCGUCG  AAGUGCAAAACuu a   a
u       a   ug aaa   c       c  A      CG             g aac 


Annotation confidence Not enough data
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Genome context
ref|NW_004558802.1|: 616099-616217 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from ete-mir-322
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ete-miR-322-5p

Accession MIMAT0074054
Description Echinops telfairi ete-miR-322-5p mature miRNA
Sequence 31 - CAGCAGCAAUUCAUGUUUUGGA - 52
Evidence not_experimental

Mature ete-miR-322-3p

Accession MIMAT0074055
Description Echinops telfairi ete-miR-322-3p mature miRNA
Sequence 68 - CAAAACGUGAAGCGCUGCUACA - 89
Evidence not_experimental

References