miRBase entry: ete-mir-99b

Stem-loop ete-mir-99b


Accession
MI0047870
Description
Echinops telfairi ete-mir-99b precursor miRNA


Sequence


cgggggccuggacaccuggguccuggcaccCACCCGUAGAACCGACCUUGCGgggccuucgccgcacaCAAGCUCGUGUCUGUGGGUCGGugucgggcucaccaucgcggcugggggccu
..(((((((((....)))))))))((((((.(((((((((..(((.((((.(.(((....))).)...)))).)))..))))))))).))))))((((((.(((.......)))))))))

Structure
--cgggggccuggacaccuggguccu      C         AC   C    --C g   c 
                          ggcacc ACCCGUAGA  CGA CUUG   G ggc u
                          |||||| |||||||||  ||| ||||   | |||  
                          cuguGG UGGGUGUCU  GCU GAAC   c ccg u
uccgggggucggcgcuaccacucggg      C         GU   C    aca g   c 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
ref|NW_004558746.1|: 16894641-16894760 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from ete-mir-99b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ete-miR-99b-5p

Accession MIMAT0074069
Description Echinops telfairi ete-miR-99b-5p mature miRNA
Sequence 31 - CACCCGUAGAACCGACCUUGCG - 52
Evidence not_experimental

Mature ete-miR-99b-3p

Accession MIMAT0074070
Description Echinops telfairi ete-miR-99b-3p mature miRNA
Sequence 69 - CAAGCUCGUGUCUGUGGGUCGG - 90
Evidence not_experimental

References