Stem-loop ete-mir-200b

Accession

MI0047880

Description

Echinops telfairi ete-mir-200b precursor miRNA

Sequence

gccccacacucaccugggggcggccaucgcCAUCUUACUGGGCAGCAUUGGAuggugucagagcucUAAUACUGCCUGGUAAUGAUGACggcggggcccuacgagcagcgauggggccg
(((((.((......)))))))..((.(((.(((((((((((((((.((((((.(.(.....).))))))).))))))))))).)))).))).))(((((((((.....)).))))))).

Structure

--gccccacacucaccugggggcgg  a   c    -           C      u g g 
                         cc ucg CAUC UUACUGGGCAG AUUGGA g u u
                         || ||| |||| ||||||||||| |||||| | | c
                         gg ggC GUAG AAUGGUCCGUC UAAUcu c a a
gccgggguagcgacgagcaucccgg  c   A    U           A      - g g 

Annotation confidence Not enough data

Genome context

ref|NW_004558721.1|: 44282125-44282243 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from ete-mir-200b

Mature ete-miR-200b-5p

• Accession: MIMAT0074087
• Description: Echinops telfairi ete-miR-200b-5p mature miRNA
• Sequence: 31 - CAUCUUACUGGGCAGCAUUGGA - 52
• Evidence: not_experimental

Mature ete-miR-200b-3p

• Accession: MIMAT0074086
• Description: Echinops telfairi ete-miR-200b-3p mature miRNA
• Sequence: 67 - UAAUACUGCCUGGUAAUGAUGAC - 89
• Evidence: not_experimental

References