Stem-loop ete-mir-1

Accession

MI0047885

Description

Echinops telfairi ete-mir-1 precursor miRNA

Sequence

agcuaacuacuuauaauaccuacucagaguACAUACUUCUUUAUGUACCCAUAugaacauacauugcuaUGGAAUGUAAAGAAGUAUGUAUuuuuggugggcaauaaagcaccaggaggaa
..................((((((.(((((((((((((((((((((..(((((..((......))..))))).))))))))))))))))))))).))))))..........((....))..

Structure

--agcuaacuacuuauaaua      c                     AC     ug  ca 
                    ccuacu agaguACAUACUUCUUUAUGU  CCAUA  aa  u
                    |||||| |||||||||||||||||||||  |||||  ||   
                    gggugg uuuUAUGUAUGAAGAAAUGUA  GGUau  uu  a
aaggaggaccacgaaauaac      u                     -A     cg  ac 

Annotation confidence Not enough data

Genome context

ref|NW_004558714.1|: 11746497-11746617 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from ete-mir-1

Mature ete-miR-1-5p

• Accession: MIMAT0074095
• Description: Echinops telfairi ete-miR-1-5p mature miRNA
• Sequence: 31 - ACAUACUUCUUUAUGUACCCAUA - 53
• Evidence: not_experimental

Mature ete-miR-1-3p

• Accession: MIMAT0074094
• Description: Echinops telfairi ete-miR-1-3p mature miRNA
• Sequence: 70 - UGGAAUGUAAAGAAGUAUGUAU - 91
• Evidence: not_experimental

References