miRBase entry: cmi-mir-13278

Stem-loop cmi-mir-13278


Accession
MI0047965
Description
Callorhinchus milii cmi-mir-13278 precursor miRNA


Sequence


uguaggugaggccacucagggguugagcugUGGGCUGUGCGCUGCUGUUUGGGuguguuacugaagucCAUUCAAGUGCAUCGGUUCAAAguacaacuuuaauacgucuggccuguuaau
..(((((.((((......(((((((.(((.(((((((((((((..((..((((..(........).))))..)))))))).))))))).))).))))))).....)))).))))).....

Structure
---ug     g    cacuca       a   g       -      GC  UU    ug guu 
     uaggu aggc      gggguug gcu UGGGCUG UGCGCU  UG  UGGG  u   a
     ||||| ||||      ||||||| ||| ||||||| ||||||  ||  ||||  |    
     guccg ucug      uuucaac ugA ACUUGGC ACGUGA  AC  ACcu  a   c
uaauu     g    -cauaa       a   A       U      --  UU    -g agu 


Annotation confidence Not enough data
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Genome context
gb|KI636030.1|: 458654-458773 [-]
Clustered miRNAs
3 other miRNAs are < 10 kb from cmi-mir-13278
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cmi-miR-13278-5p

Accession MIMAT0074252
Description Callorhinchus milii cmi-miR-13278-5p mature miRNA
Sequence 31 - UGGGCUGUGCGCUGCUGUUUGGG - 53
Evidence not_experimental

Mature cmi-miR-13278-3p

Accession MIMAT0074251
Description Callorhinchus milii cmi-miR-13278-3p mature miRNA
Sequence 69 - CAUUCAAGUGCAUCGGUUCAAA - 90
Evidence not_experimental

References