miRBase entry: cmi-mir-143

Stem-loop cmi-mir-143


Accession
MI0048053
Description
Callorhinchus milii cmi-mir-143 precursor miRNA


Sequence


ggaggacggccaacacaucaaucagccagaGGUGCAGUGCUGCAUCUCUGGuuaguugugagucUGAGAUGAAGCACUGUAGCUCuggaggaugaacacugcaucaauggccuug
.......(((((...(((((.((..((((((.(((((((((.((((((.(((((....))).)).)))))).))))))))).))))))..)))))....))......)))))...

Structure
ggaggac     ---aca  ----   a  ag      G         G      U  -   g 
       ggcca      ca    uca uc  ccagaG UGCAGUGCU CAUCUC GG uua u
       |||||      ||    ||| ||  |||||| ||||||||| |||||| || |||  
       ccggu      gu    agu ag  gguCUC AUGUCACGA GUAGAG cu agu u
----guu     aacuac  caca   -  ga      G         A      U  g   g 


Annotation confidence Not enough data
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Genome context
gb|KI636010.1|: 209410-209524 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from cmi-mir-143
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cmi-miR-143-5p

Accession MIMAT0074414
Description Callorhinchus milii cmi-miR-143-5p mature miRNA
Sequence 31 - GGUGCAGUGCUGCAUCUCUGG - 51
Evidence not_experimental

Mature cmi-miR-143-3p

Accession MIMAT0074413
Description Callorhinchus milii cmi-miR-143-3p mature miRNA
Sequence 65 - UGAGAUGAAGCACUGUAGCUC - 85
Evidence not_experimental

References