miRBase entry: cmi-mir-130a-1

Stem-loop cmi-mir-130a-1


Accession
MI0048072
Description
Callorhinchus milii cmi-mir-130a-1 precursor miRNA


Sequence


uguguguguuauuuaagucuguuguccgggGCCCUUUUCAUGUUGUACUACUgggaaguugaguuaagCAGUGCAAUAUUAAAAGGGCAUuggcuggcaguccucuccaccuacccuaca
.(((.(((........(.((((((.((((.((((((((.((((((((((.((..............)).)))))))))).)))))))).)))).)))))).).....))).)))......

Structure
-----u   u   uuauuuaa u      u    g        C          A  gggaag 
      gug gug        g cuguug ccgg GCCCUUUU AUGUUGUACU CU      u
      ||| |||        | |||||| |||| |||||||| |||||||||| ||       
      cau cac        c gacggu gguU CGGGAAAA UAUAACGUGA ga      u
acaucc   c   ---cucuc u      c    A        U          C  auugag 


Annotation confidence Not enough data
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Genome context
gb|AAVX02053842.1|: 1531-1650 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from cmi-mir-130a-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cmi-miR-130a-1-5p

Accession MIMAT0074446
Description Callorhinchus milii cmi-miR-130a-1-5p mature miRNA
Sequence 31 - GCCCUUUUCAUGUUGUACUACU - 52
Evidence not_experimental

Mature cmi-miR-130a-3p

Accession MIMAT0074444
Description Callorhinchus milii cmi-miR-130a-3p mature miRNA
Sequence 69 - CAGUGCAAUAUUAAAAGGGCAU - 90
Evidence not_experimental

References