miRBase entry: cmi-mir-449d

Stem-loop cmi-mir-449d


Accession
MI0048101
Description
Callorhinchus milii cmi-mir-449d precursor miRNA


Sequence


gcagggugauugggaguguguggguugauuAGGCAGUGUAAUGUUAGCUGGCUgcaauguaggaaucaGCAGCUACAAGCACUACCACAuuagcucaugauuucacaacaacauaaaga
.....((..((((((((..((((((((((..((.(((((..(((.(((((.(((..((......))))))))))))).))))).))..)))))))))).))))).)))..)).......

Structure
--gcagg  ga   -     gu          uA  C     AA   U     G   ca  gu 
       gu  uug ggagu  guggguugau  GG AGUGU  UGU AGCUG CUg  au  a
       ||  ||| |||||  ||||||||||  || |||||  ||| ||||| |||  ||   
       ca  aac cuuua  uacucgauuA  CC UCACG  ACA UCGAC Gac  ua  g
agaaaua  ac   a     -g          CA  A     -A   -     -   --  ag 


Annotation confidence Not enough data
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Genome context
gb|KI635876.1|: 5895181-5895299 [+]
Clustered miRNAs
3 other miRNAs are < 10 kb from cmi-mir-449d
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cmi-miR-449d-5p

Accession MIMAT0074497
Description Callorhinchus milii cmi-miR-449d-5p mature miRNA
Sequence 31 - AGGCAGUGUAAUGUUAGCUGGCU - 53
Evidence not_experimental

Mature cmi-miR-449d-3p

Accession MIMAT0074498
Description Callorhinchus milii cmi-miR-449d-3p mature miRNA
Sequence 69 - GCAGCUACAAGCACUACCACA - 89
Evidence not_experimental

References