miRBase entry: cmi-mir-449b

Stem-loop cmi-mir-449b


Accession
MI0048103
Description
Callorhinchus milii cmi-mir-449b precursor miRNA


Sequence


aacguucacaaugaagugccagagucuggaAGGCAGUGUACAGUUAGCUGGCUGCUugguguuuggacagCAGCCGCUACGUAUUCCGCCACUUGCCUCGuggucugucacgucagaugauc
.....(((...(((.(((.((((.((..((.((((((((((.((.(((.(((((((..((......)))))))))))))))))......))).))))))..)))))).))).)))..)))..

Structure
aacgu   caa   a   c    g  ug  A    -   ------   A  U   U       ug  gu 
     uca   uga gug caga uc  ga GGCA GUG      UAC GU AGC GGCUGCU  gu  u
     |||   ||| ||| |||| ||  || |||| |||      ||| || ||| |||||||  ||   
     agu   acu cac gucu gg  CU CCGU CAC      AUG CA UCG CCGACga  ca  u
---cu   -ag   g   u    -  uG  -    U   CGCCUU   -  -   -       --  gg 


Annotation confidence Not enough data
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Genome context
gb|KI635876.1|: 5894591-5894712 [+]
Clustered miRNAs
3 other miRNAs are < 10 kb from cmi-mir-449b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cmi-miR-449b-5p

Accession MIMAT0074501
Description Callorhinchus milii cmi-miR-449b-5p mature miRNA
Sequence 31 - AGGCAGUGUACAGUUAGCUGGCUGCU - 56
Evidence not_experimental

Mature cmi-miR-449b-3p

Accession MIMAT0074502
Description Callorhinchus milii cmi-miR-449b-3p mature miRNA
Sequence 71 - CAGCCGCUACGUAUUCCGCCACUUGCCUCG - 100
Evidence not_experimental

References