miRBase entry: cmi-mir-449a

Stem-loop cmi-mir-449a


Accession
MI0048104
Description
Callorhinchus milii cmi-mir-449a precursor miRNA


Sequence


gagaaggaagcauguagggauguggugguuAGGCAGUGUACUGCUAGCUGGCUGUUgugucugacagguuagCAGCUGCUAGCUACACUCCACAcugcugcaucugagagcacuucaucaucag
((((..((((..(((..((((((((((((..((.((((((..((((((.((((((((..(((...))).))))))))))))))))))))))..))))))))))))....))))))).)).))..

Structure
--  -  ag    ca   --ag            uA  C      CU      U        ug   g 
  ga ga  gaag  ugu    ggaugugguggu  GG AGUGUA  GCUAGC GGCUGUUg  ucu  
  || ||  ||||  |||    ||||||||||||  || ||||||  |||||| ||||||||  ||| a
  cu cu  cuuc  acg    ucuacgucgucA  CC UCACAU  CGAUCG UCGACgau  gga  
ga  a  -a    --   agag            CA  -      --      -        -u   c 


Annotation confidence Not enough data
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Genome context
gb|KI635876.1|: 5893678-5893801 [+]
Clustered miRNAs
3 other miRNAs are < 10 kb from cmi-mir-449a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cmi-miR-449a-5p

Accession MIMAT0074503
Description Callorhinchus milii cmi-miR-449a-5p mature miRNA
Sequence 31 - AGGCAGUGUACUGCUAGCUGGCUGUU - 56
Evidence not_experimental

Mature cmi-miR-449a-3p

Accession MIMAT0074504
Description Callorhinchus milii cmi-miR-449a-3p mature miRNA
Sequence 73 - CAGCUGCUAGCUACACUCCACA - 94
Evidence not_experimental

References