miRBase entry: cmi-mir-17

Stem-loop cmi-mir-17


Accession
MI0048145
Description
Callorhinchus milii cmi-mir-17 precursor miRNA


Sequence


ugaggggagcuaauucuggguccgcaguacCAAAGUGCAAAUAGUGGUAGGUagugcagagugaauccuagcuacacuauUUACACUUCAAGCACUGCUGUgcccaaucgcugacggggaaac
.....(((.(((....))).)))(((((.....(((((....((((.(((((((((...(((........))).)))))))))))))....)))))))))).(((..((...))..)))....

Structure
ugaggggagcuaauucugggucc     acCAA     AAAU    G         cag   gaa 
                       gcagu     AGUGC    AGUG UAGGUagug   agu   u
                       |||||     |||||    |||| |||||||||   |||    
                       UGUCG     UCACG    UCAC AUUuaucac   ucg   c
-caaaggggcagucgcuaacccg     -----     AACU    -         --a   auc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
gb|KI635855.1|: 9356616-9356738 [+]
Clustered miRNAs
4 other miRNAs are < 10 kb from cmi-mir-17
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cmi-miR-17-5p

Accession MIMAT0074579
Description Callorhinchus milii cmi-miR-17-5p mature miRNA
Sequence 31 - CAAAGUGCAAAUAGUGGUAGGU - 52
Evidence not_experimental

Mature cmi-miR-17-3p

Accession MIMAT0074580
Description Callorhinchus milii cmi-miR-17-3p mature miRNA
Sequence 81 - UUACACUUCAAGCACUGCUGU - 101
Evidence not_experimental

References