miRBase entry: cmi-mir-16c

Stem-loop cmi-mir-16c


Accession
MI0048150
Description
Callorhinchus milii cmi-mir-16c precursor miRNA


Sequence


auuccugcggucgcucugucggcaacgcuuUAGCAGCACGUAAAUACUGGAGuugagaucccugugucuCCAGUAUUGCCAAUGCUGCUCUAgugaggccgacgcucaucuccagcaccucc
.....(((((......(((((((..((((..(((((((.((((.((((((((...((....))....))))))))))))...)))))))..))))..))))))).......)).))).....

Structure
auucc   -  -ucgcuc       aa    uU       --C    A        -uug  a 
     ugc gg       ugucggc  cgcu  AGCAGCA   GUAA UACUGGAG    ag u
     ||| ||       |||||||  ||||  |||||||   |||| ||||||||    ||  
     acg cc       gcagccg  gugA  UCGUCGU   CGUU AUGACCuc    uc c
ccucc   a  ucuacuc       ga    UC       AAC    -        ugug  c 


Annotation confidence Not enough data
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Genome context
gb|KI635856.1|: 9695155-9695276 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from cmi-mir-16c
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cmi-miR-16c-5p

Accession MIMAT0074589
Description Callorhinchus milii cmi-miR-16c-5p mature miRNA
Sequence 31 - UAGCAGCACGUAAAUACUGGAG - 52
Evidence not_experimental

Mature cmi-miR-16c-3p

Accession MIMAT0074590
Description Callorhinchus milii cmi-miR-16c-3p mature miRNA
Sequence 70 - CCAGUAUUGCCAAUGCUGCUCUA - 92
Evidence not_experimental

References