miRBase entry: cmi-mir-200b

Stem-loop cmi-mir-200b


Accession
MI0048167
Description
Callorhinchus milii cmi-mir-200b precursor miRNA


Sequence


uguacugaaagacuucuggggagguauuauCAUCUUACUGGGCAGCAUUGGAuguaaacugguauucUAAUACUGCCUGGUAAUGAUGAUgauggcucucuaacuucaucgaagaagaac
................(((((((.(((((((((((((((((((((.((((((.............)))))).))))))))))).)))))))))).))))))).((((......))))...

Structure
--uguacugaaagacuuc       g          -           C      uguaa 
                  uggggag uauuauCAUC UUACUGGGCAG AUUGGA     a
                  ||||||| |||||||||| ||||||||||| ||||||     c
                  aucucuc guagUAGUAG AAUGGUCCGUC UAAUcu     u
caagaagaagcuacuuca       g          U           A      uaugg 


Annotation confidence Not enough data
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Genome context
gb|KI636030.1|: 466220-466339 [-]
Clustered miRNAs
3 other miRNAs are < 10 kb from cmi-mir-200b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cmi-miR-200b-5p

Accession MIMAT0074622
Description Callorhinchus milii cmi-miR-200b-5p mature miRNA
Sequence 31 - CAUCUUACUGGGCAGCAUUGGA - 52
Evidence not_experimental

Mature cmi-miR-200b-3p

Accession MIMAT0074621
Description Callorhinchus milii cmi-miR-200b-3p mature miRNA
Sequence 68 - UAAUACUGCCUGGUAAUGAUGAU - 90
Evidence not_experimental

References