miRBase entry: cmi-mir-1-3

Stem-loop cmi-mir-1-3


Accession
MI0048171
Description
Callorhinchus milii cmi-mir-1-3 precursor miRNA


Sequence


gcugcgugaaaaacuacacuauccaaaacuGCAUACUUCUUCAUAUGCCCAUAugaaaugcuuugcuaUGGAAUGUAAAGAAGUAUGUAUuuuuggggugaaacaucugcagcaaugaga
((((((.((.......((((..((((((.((((((((((((.((((..(((((..(((...)))..))))).)))).)))))))))))).)))))))))).....)))))))).......

Structure
-------      u  aaaacua    au      c            C    GC     ug   u 
       gcugcg ga       cacu  ccaaaa uGCAUACUUCUU AUAU  CCAUA  aaa  
       |||||| ||       ||||  |||||| |||||||||||| ||||  |||||  ||| g
       cgacgu cu       gugg  gguuuu AUGUAUGAAGAA UGUA  GGUau  uuu  
agaguaa      -  --acaaa    --      U            A    -A     cg   c 


Annotation confidence Not enough data
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Genome context
gb|KI635975.1|: 547750-547869 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from cmi-mir-1-3
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cmi-miR-1-3-5p

Accession MIMAT0074629
Description Callorhinchus milii cmi-miR-1-3-5p mature miRNA
Sequence 31 - GCAUACUUCUUCAUAUGCCCAUA - 53
Evidence not_experimental

Mature cmi-miR-1-3p

Accession MIMAT0074628
Description Callorhinchus milii cmi-miR-1-3p mature miRNA
Sequence 69 - UGGAAUGUAAAGAAGUAUGUAU - 90
Evidence not_experimental

References