miRBase entry: cmi-mir-1-1

Stem-loop cmi-mir-1-1


Accession
MI0048173
Description
Callorhinchus milii cmi-mir-1-1 precursor miRNA


Sequence


ggaccugcaacuuucuuuccugccuggaacACAUACUUCUUUAUAUACCCAUAugaacuuaacagcuaUGGAAUGUAAAGAAGUAUGUAUuuuugguggguauugaacaacuaagaagag
....((......(((..(((((((.((((.((((((((((((((((..(((((.............))))).)))))))))))))))).)))).)))))).)..)))......)).....

Structure
-ggac  gcaacu   uu -      u    c                AC     ugaac 
     cu      uuc  u ccugcc ggaa ACAUACUUCUUUAUAU  CCAUA     u
     ||      |||  | |||||| |||| ||||||||||||||||  |||||     u
     ga      aag  a gggugg uuuU UGUAUGAAGAAAUGUA  GGUau     a
gagaa  aucaac   uu u      u    A                -A     cgaca 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
gb|KI635943.1|: 1405306-1405425 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from cmi-mir-1-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cmi-miR-1-1-5p

Accession MIMAT0074631
Description Callorhinchus milii cmi-miR-1-1-5p mature miRNA
Sequence 31 - ACAUACUUCUUUAUAUACCCAUA - 53
Evidence not_experimental

Mature cmi-miR-1-3p

Accession MIMAT0074628
Description Callorhinchus milii cmi-miR-1-3p mature miRNA
Sequence 69 - UGGAAUGUAAAGAAGUAUGUAU - 90
Evidence not_experimental

References