miRBase entry: pma-mir-181a-2

Stem-loop pma-mir-181a-2


Accession
MI0048202
Description
Petromyzon marinus pma-mir-181a-2 precursor miRNA


Sequence


gucaaggcggggucgaggcgggccccguggAACAUUCAACGCUGUCGGUGAGUuuuguuugaacuccucauaugaaaauaaaCCAUCGACCGUUGACUGUACCacgugacccggccguuaccacggcaacacc
......((.((((.(.((((((.(.(((((.(((.((((((..(((((((.((((.((((...............))))))))))))))))))))).))).))))).).))).))).).))).).))......

Structure
gucaag  g -   c a   -   c c     A   U      CU       A    u    gaacuc 
      gc g ggu g ggc ggg c cgugg ACA UCAACG  GUCGGUG GUuu guuu      c
      || | ||| | ||| ||| | ||||| ||| ||||||  ||||||| |||| ||||      u
      cg c cca u ccg ccc g gcaCC UGU AGUUGC  CAGCUAC Caaa uaaa      c
ccacaa  g a   u g   g   a u     A   C      --       -    -    aguaua 


Annotation confidence Not enough data
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Genome context
ref|NC_046118.1|: 4215237-4215369 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from pma-mir-181a-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature pma-miR-181a-2-5p

Accession MIMAT0074684
Description Petromyzon marinus pma-miR-181a-2-5p mature miRNA
Sequence 31 - AACAUUCAACGCUGUCGGUGAGU - 53
Evidence not_experimental

Mature pma-miR-181a-2-3p

Accession MIMAT0074685
Description Petromyzon marinus pma-miR-181a-2-3p mature miRNA
Sequence 83 - CCAUCGACCGUUGACUGUACC - 103
Evidence not_experimental

References