Stem-loop pma-mir-25

Accession

MI0048219

Description

Petromyzon marinus pma-mir-25 precursor miRNA

Sequence

gaugcggggucucgucuggacggcgcgagcAGGCGGAGACUGGAGCAAGUGCUcuacacucgugguggCAUUGCACUAGUCUCAGUCUGCccgagucgccgcccgaaacuuucaccaccc
.....(((((....((.((.(((((((.((((((.((((((((.((((.((((((((....)))).)))))))).)))))))).)))))).))...))))))).)).......))).)).

Structure

gaugc  -   ---cucg  u  a     ---  a      G        A    G    -    a 
     gg ggu       uc gg cggcg   cg gcAGGC GAGACUGG GCAA UGCU cuac c
     || |||       || || |||||   || |||||| |||||||| |||| |||| ||||  
     cc cca       ag cc gccgc   gc CGUCUG CUCUGAUC CGUU ACgg ggug u
----c  a   cuuucaa  c  -     uga  c      A        A    -    u    c 

Annotation confidence Not enough data

Genome context

ref|NC_046115.1|: 754282-754401 [+]

Clustered miRNAs

8 other miRNAs are < 10 kb from pma-mir-25

Mature pma-miR-25-5p

• Accession: MIMAT0074713
• Description: Petromyzon marinus pma-miR-25-5p mature miRNA
• Sequence: 31 - AGGCGGAGACUGGAGCAAGUGCU - 53
• Evidence: not_experimental

Mature pma-miR-25-3p

• Accession: MIMAT0074712
• Description: Petromyzon marinus pma-miR-25-3p mature miRNA
• Sequence: 69 - CAUUGCACUAGUCUCAGUCUGC - 90
• Evidence: not_experimental

References