miRBase entry: pma-mir-34a

Stem-loop pma-mir-34a


Accession
MI0048223
Description
Petromyzon marinus pma-mir-34a precursor miRNA


Sequence


ggugacagccugcgccugugcguggccccuUGGCAGUGUCUUAGCUGGUUGUUguuguugcuguugcugacgacgcugacgucgccaaCAAUCAGUUGGCUACUGCCCUCgggacgcggcacccacacggcuacaggcga
.......(((((.(((((((.(((.((((..(((((((.((.((((((((((((.....((....))...(((((....))))).)))))))))))))).)))))))...)))....).))).)))).)))..)))))..

Structure
ggugaca     -c   -    c   g ----   -uU       U  U            uuguugcuguugcuga     c 
       gccug  gcc ugug gug c    ccc   GGCAGUG CU AGCUGGUUGUUg                cgacg u
       |||||  ||| |||| ||| |    |||   ||||||| || ||||||||||||                |||||  
       cggac  cgg acac cac g    ggg   CCGUCAU GG UUGACUAACaac                gcugc g
-----ag     au   c    c   g cgca   CUC       C  -            ---------------c     a 


Annotation confidence Not enough data
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Genome context
ref|NC_046107.1|: 11782367-11782506 [+]

Database links

Mature pma-miR-34a-5p

Accession MIMAT0074720
Description Petromyzon marinus pma-miR-34a-5p mature miRNA
Sequence 31 - UGGCAGUGUCUUAGCUGGUUGUU - 53
Evidence not_experimental

Mature pma-miR-34a-3p

Accession MIMAT0074721
Description Petromyzon marinus pma-miR-34a-3p mature miRNA
Sequence 89 - CAAUCAGUUGGCUACUGCCCUC - 110
Evidence not_experimental

References