Accession
MI0048236
Description
Petromyzon marinus
pma-mir-200c precursor miRNA
Sequence
gagaugguuuugaaucggacgcuugagacgCGUCUUACCUGACAGUGGUAGAuuuugcuuccgugcgcucUAACACUGUCUGGUAAUGAUGUUucucggguuugucaaaagaucgccgccccg
(.(.((((.........(((((((((((.((((((((((.(((((((.((((...(((......))).)))).))))))).))))).))))).))))))))..)))........)))).).).
(.(.((((.........(((((((((((.((((((((((.(((((((.((((...(((......))).)))).))))))).))))).))))).))))))))..)))........)))).).).
Structure
- a a uuugaaucg -- c - U G uuu uu g g uggu gac gcuugaga gCGUC UUACC GACAGUG UAGA ugc c | | |||| ||| |||||||| ||||| ||||| ||||||| |||| ||| c c gccg cug ugggcucu UGUAG AAUGG CUGUCAC AUcu gcg c g c c -cuagaaaa uu U U U A --c ug
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
ref|NC_046107.1|: 8662327-8662449 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from pma-mir-200c
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature pma-miR-200c-5p
| Accession | MIMAT0074745 |
| Description | Petromyzon marinus pma-miR-200c-5p mature miRNA |
| Sequence | 31 - CGUCUUACCUGACAGUGGUAGA - 52 |
| Evidence | not_experimental |
Mature pma-miR-200c-3p
| Accession | MIMAT0074744 |
| Description | Petromyzon marinus pma-miR-200c-3p mature miRNA |
| Sequence | 71 - UAACACUGUCUGGUAAUGAUGUU - 93 |
| Evidence | not_experimental |
References
|
|
