miRBase entry: tni-mir-214-2

Stem-loop tni-mir-214-2


Accession
MI0048274
Description
Tetraodon nigroviridis tni-mir-214-2 precursor miRNA


Sequence


agcaccuggcuggaggaguugcagugugucUGCCUAUCUCCACUUGCUGUGCagaauauccuccaaccuguACAGCAGGCACAGACAGGCAGAuagacaucagcccaucgagagcgccagcag
.....((((((.((((.((((..((.(((((((((.(((...((((((((((((.............))))))))))))...))).))))))))).))..)))))).)).)....)))))...

Structure
agcac     ---- g  -  a    ca  g         A   CCA            aauau 
     cuggc    u ga gg guug  gu ugucUGCCU UCU   CUUGCUGUGCag     c
     |||||    | || || ||||  || ||||||||| |||   ||||||||||||     c
     gaccg    a cu cc cgac  ca auAGACGGA AGA   GGACGACAuguc     u
--gac     cgag g  a  -    ua  g         C   CAC            caacc 


Annotation confidence Not enough data
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Genome context
15: 2935595-2935657 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from tni-mir-214-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature tni-miR-214-2-5p

Accession MIMAT0074817
Description Tetraodon nigroviridis tni-miR-214-2-5p mature miRNA
Sequence 31 - UGCCUAUCUCCACUUGCUGUGC - 52
Evidence not_experimental

Mature tni-miR-214-2-3p

Accession MIMAT0074816
Description Tetraodon nigroviridis tni-miR-214-2-3p mature miRNA
Sequence 72 - ACAGCAGGCACAGACAGGCAGA - 93
Evidence not_experimental

References