miRBase entry: tni-mir-24a-3

Stem-loop tni-mir-24a-3


Accession
MI0048316
Description
Tetraodon nigroviridis tni-mir-24a-3 precursor miRNA


Sequence


ccaucgcucacgucuggguugugcccuccuGUGCCUACUGAACUGGUAUCAGUguuuuacuggaaaacUGGCUCAGUUCAGCAGGAACAGgagugcagccuuuucuccgucaggauccaa
..(((.((.(((...(((((((...(((((((.(((.(((((((((..(((((.((((....))))))))).))))))))).))).))))))).)))))))......))).)))))....

Structure
--cc   g  c   ---ucu       gcc       G   A         UA     g    a 
    auc cu acg      ggguugu   cuccuGU CCU CUGAACUGG  UCAGU uuuu c
    ||| || |||      |||||||   ||||||| ||| |||||||||  ||||| ||||  
    uag ga ugc      uccgacg   gagGACA GGA GACUUGACU  GGUca aaag u
aacc   -  c   cucuuu       --u       A   C         -C     -    g 


Annotation confidence Not enough data
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Genome context
1: 16060478-16060537 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from tni-mir-24a-3
Name Accession Chromosome Start End Strand Confidence




Database links

Mature tni-miR-24a-3-5p

Accession MIMAT0074896
Description Tetraodon nigroviridis tni-miR-24a-3-5p mature miRNA
Sequence 31 - GUGCCUACUGAACUGGUAUCAGU - 53
Evidence not_experimental

Mature tni-miR-24a-3-3p

Accession MIMAT0074895
Description Tetraodon nigroviridis tni-miR-24a-3-3p mature miRNA
Sequence 69 - UGGCUCAGUUCAGCAGGAACAG - 90
Evidence not_experimental

References