Accession
MI0048339
Description
Tetraodon nigroviridis
tni-let-7k precursor miRNA
Sequence
agggaggccccgcuccagugcucugcagggUGAGGUAGUUGGUUGUAUGGUUucgcaucauaaagagccuggagauaaCUGUACAACCUUCUAGCUUUCCcugcggugucacccagacgucacgggagcu
.(((....)))(((((.((((.((((((((.(((.(((..((((((((((((((((.((.....)))).....)).))))))))))))..))).))).)))))))).(((.....)))).))).))))).
.(((....)))(((((.((((.((((((((.(((.(((..((((((((((((((((.((.....)))).....)).))))))))))))..))).))).)))))))).(((.....)))).))).))))).
Structure
agggaggcccc a - -----------u U G UU - ----- a a
gcucc gug c cugcaggg GAG UAG GGUUGUAUGGUU uc gc uc u
||||| ||| | |||||||| ||| ||| |||||||||||| || || || a
cgagg cac g ggcgucCC UUC AUC CCAACAUGUCaa ag cg ag a
----------u g u cagacccacugu U G UU u agguc - a
Annotation confidence
Not enough data
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Genome context
21_random: 1794498-1794567 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from tni-let-7k
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature tni-let-7k-5p
| Accession | MIMAT0074940 |
| Description | Tetraodon nigroviridis tni-let-7k-5p mature miRNA |
| Sequence | 31 - UGAGGUAGUUGGUUGUAUGGUU - 52 |
| Evidence | not_experimental |
Mature tni-let-7k-3p
| Accession | MIMAT0074941 |
| Description | Tetraodon nigroviridis tni-let-7k-3p mature miRNA |
| Sequence | 79 - CUGUACAACCUUCUAGCUUUCC - 100 |
| Evidence | not_experimental |
References
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