miRBase entry: egr-mir-13370

Stem-loop egr-mir-13370


Accession
MI0048783
Description
Echinococcus granulosus egr-mir-13370 precursor miRNA


Sequence


aaaguggcgccucaccagaaccgagggauaAACCACUAUCGUAUUACAACuagaguacggcggggcgcauuggucuccuauugcuuggccuuuguaccucuacgacaccuaugcugguuugauuuugacaugcuuauuucuuggagcaaauaagugaugggcacaaauuugggaaaagucggacgcaggguauaucucuggcuugcgagauguuaagugcuccucaguaacgaaguuaaaucuaucuguuugcccuuauccaaaagagcuauUGUAACGCGAUAGUGGUUUAccccucgguauuggugaggcgccaacauug
....((((((((((((((.((((((((.((((((((((((((.((((((.(((.((.((..((((.(((..((((...........))))..))).))))..))))((((.(((..((((((((((..((((((((((.((((.......)))).))))))))......))...)))))))))))))))))(((((((........)))))))((((.((....(((....((.......))...)))...)).))))..........))))))))).)))))))))))))).)))))))).))))))))))))))......

Structure
--aaag              a        a              A      C   ------------------------aguacggcggggcgcauuggucuccuauugcuuggccuuuguaccucuacgac    a   ug          -ga  ------        u    ga 
      uggcgccucaccag accgaggg uaAACCACUAUCGU UUACAA uag                                                                             accu ugc  guuugauuuu   ca      ugcuuauu cuug  g
      |||||||||||||| |||||||| |||||||||||||| |||||| |||                                                                             |||| |||  ||||||||||   ||      |||||||| ||||  c
      accgcggagugguu uggcuccc AUUUGGUGAUAGCG AAUGUu auc                                                                             uggg acg  caggcugaaa   gu      acggguag gaau  a
guuaca              a        c              C      -   gagaaaaccuauucccguuugucuaucuaaauugaagcaaugacuccucgugaauuguagagcguucggucucuaua    -   --          agg  uuaaac        u    aa 


Annotation confidence Not enough data
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Genome context
APAU02000016.1: 265656-265917 []

Database links

Mature egr-miR-13370-5p

Accession MIMAT0075614
Description Echinococcus granulosus egr-miR-13370-5p mature miRNA
Sequence 31 - AACCACUAUCGUAUUACAAC - 50
Evidence not_experimental

Mature egr-miR-13370-3p

Accession MIMAT0075613
Description Echinococcus granulosus egr-miR-13370-3p mature miRNA
Sequence 273 - UGUAACGCGAUAGUGGUUUA - 292
Evidence not_experimental

References