Stem-loop tur-mir-87a-1

Accession

MI0048841

Description

Tetranychus urticae tur-mir-87a-1 precursor miRNA

Sequence

acucggcaagugucaucauugcguugaacGUGCCCGAUACUUUGUCUCAACCUgagaguuuuaaucuugcaaaugaaaaagGUGAGCAAAGUUUCAGGUGUGUuugguguaauuugcaacuucauugggugca
((((((.((((..((..(((((((((((((((((.((.((((((.((((.(((((((.......))))...........))))))))))))).)).))))))))))))))))).))..))))..))))))...

Structure

---      -c    gu  uc                 C  U      U    A   -----------    gu 
   acucgg  aagu  ca  auugcguugaacGUGCC GA ACUUUG CUCA CCU           gaga  u
   ||||||  ||||  ||  ||||||||||||||||| || |||||| |||| |||           ||||  u
   uggguu  uuca  gu  uaaugugguuUGUGUGG CU UGAAAC GAGU Gga           uucu  u
acg      ac    ac  -u                 A  U      -    -   aaaaguaaacg    aa 

Annotation confidence Not enough data

Genome context

emb|HE587301|: 4415395-4415527 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from tur-mir-87a-1

Mature tur-miR-87a-1-5p

• Accession: MIMAT0075726
• Description: Tetranychus urticae tur-miR-87a-1-5p mature miRNA
• Sequence: 30 - GUGCCCGAUACUUUGUCUCAACCU - 53
• Evidence: not_experimental

Mature tur-miR-87a-3p

• Accession: MIMAT0023067
• Description: Tetranychus urticae tur-miR-87a-3p mature miRNA
• Sequence: 82 - GUGAGCAAAGUUUCAGGUGUGU - 103
• Evidence: experimental ; Illumina [1]

References