miRBase entry: ovu-mir-13417

Stem-loop ovu-mir-13417


Accession
MI0048892
Description
Octopus vulgaris ovu-mir-13417 precursor miRNA


Sequence


cugaccgaccuauauucugauauaaugaguAAUUUGGUGUUUGUGUCAACCUgguaauaauugaaauagGCUGACGCUAGUACCAAGUUCCucauuauaagaaagcauuccaaacgcuuau
...............(((..(((((((((.(((((((((((.((((((.((((.............)))).)))))).))))))))))).))))))))))))((((.........))))..

Structure
----cugaccgaccuauau   ga         u           U      A    guaau 
                   ucu  uauaaugag AAUUUGGUGUU GUGUCA CCUg     a
                   |||  ||||||||| ||||||||||| |||||| ||||     a
                   aga  auauuacuC UUGAACCAUGA CGCAGU Ggau     u
uauucgcaaaccuuacgaa   --         C           U      C    aaagu 


Annotation confidence Not enough data
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Genome context
RXHP01005660.1: 5089-5149 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ovu-mir-13417
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ovu-miR-13417-5p

Accession MIMAT0075816
Description Octopus vulgaris ovu-miR-13417-5p mature miRNA
Sequence 31 - AAUUUGGUGUUUGUGUCAACCU - 52
Evidence not_experimental

Mature ovu-miR-13417-3p

Accession MIMAT0075815
Description Octopus vulgaris ovu-miR-13417-3p mature miRNA
Sequence 70 - GCUGACGCUAGUACCAAGUUCC - 91
Evidence not_experimental

References