Stem-loop ovu-mir-13440

Accession

MI0048915

Description

Octopus vulgaris ovu-mir-13440 precursor miRNA

Sequence

gccaagaauggaacauugaagagcgauugcAUCGGUCAACAUUGGAUGUUCAUAUucuuuugauagAUGAGUCCAGUUUAACCGUUGUaaucuuccucaccagcgucuacgguuccaa
........((((((..(((.(((.(((((((.((((.((.(((((((..((((..((....))...))))))))))))).)))).)))))))))).)))....((....)))))))).

Structure

gccaagaa      ----------au   a   c       U    C  C       GU    -AU  u 
        uggaac            uga gag gauugcA CGGU AA AUUGGAU  UCAU   uc u
        ||||||            ||| ||| ||||||| |||| || |||||||  ||||   ||  
        accuug            acu cuu cuaaUGU GCCA UU UGACCUG  AGUA   ag u
-------a      gcaucugcgacc   c   -       U    A  -       --    gau  u 

Annotation confidence Not enough data

Genome context

RXHP01021140.1: 38800-38857 []

Clustered miRNAs

1 other miRNA is < 10 kb from ovu-mir-13440

Mature ovu-miR-13440-5p

• Accession: MIMAT0075861
• Description: Octopus vulgaris ovu-miR-13440-5p mature miRNA
• Sequence: 31 - AUCGGUCAACAUUGGAUGUUCAUAU - 55
• Evidence: not_experimental

Mature ovu-miR-13440-3p

• Accession: MIMAT0075862
• Description: Octopus vulgaris ovu-miR-13440-3p mature miRNA
• Sequence: 67 - AUGAGUCCAGUUUAACCGUUGU - 88
• Evidence: not_experimental

References