miRBase entry: ovu-mir-13509

Stem-loop ovu-mir-13509


Accession
MI0048986
Description
Octopus vulgaris ovu-mir-13509 precursor miRNA


Sequence


ccuaccucucucacgguguuuuccuuagcgUGGUUGAAUAUGCUUCUGGUCCAUGuggaugauaguuagucaUGACUAGAUCAUACUCAUCCACCcuguggaauaacagagcagcguuggcgcca
((.((((((((....((...((((.(((.((((.(((.((((..(((((((.(((..(((....)))...)))))))))).)))).))).)))).))).))))..)))))).)).)).)).....

Structure
-----  u  -  -    cacg  guu    u   c    U   A    CU       C   -ug   g 
     cc ac cu cucu    gu   uucc uag gUGG UGA UAUG  UCUGGUC AUG   gau a
     || || || ||||    ||   |||| ||| |||| ||| ||||  ||||||| |||   |||  
     gg ug ga gaga    ca   aagg guc CACC ACU AUAC  AGAUCAG Uac   uug u
accgc  u  c  c    ----  -au    u   C    U   C    -U       -   uga   a 


Annotation confidence Not enough data
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Genome context
RXHP01026523.1: 137402-137466 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ovu-mir-13509
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ovu-miR-13509-5p

Accession MIMAT0076003
Description Octopus vulgaris ovu-miR-13509-5p mature miRNA
Sequence 31 - UGGUUGAAUAUGCUUCUGGUCCAUG - 55
Evidence not_experimental

Mature ovu-miR-13509-3p

Accession MIMAT0076002
Description Octopus vulgaris ovu-miR-13509-3p mature miRNA
Sequence 73 - UGACUAGAUCAUACUCAUCCACC - 95
Evidence not_experimental

References