Accession
MI0049002
Description
Daphnia pulex
dpu-mir-1175 precursor miRNA
Sequence
aaguuuuuuuuucugacuggauuggggaauAAGUGGAGCAGUGGAUCUCCACUuugauacauuagauauaagUGAGAUUCAACUACUCCAACUUCUuccccccagaucauuuucuucuuugauccg
.............(((((((...((((((.((((((((.((((((((((.((((..((.......))..))))))))))).))).)))).)))).)))))))))).))).................
.............(((((((...((((((.((((((((.((((((((((.((((..((.......))..))))))))))).))).)))).)))).)))))))))).))).................
Structure
----aaguuuuuuuuuc - auu u - C - C ug ac
uga cugg ggggaa AAGU GGAG AGU GGAUCUC ACUu au a
||| |||| |||||| |||| |||| ||| ||||||| |||| || u
acu gacc ccccuU UUCA CCUC UCA CUUAGAG Ugaa ua u
gccuaguuucuucuuuu a --- C A A A - ua ga
Annotation confidence
Not enough data
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Genome context
DAPPUscaffold_113: 97594-97659 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from dpu-mir-1175
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature dpu-miR-1175-5p
| Accession | MIMAT0076035 |
| Description | Daphnia pulex dpu-miR-1175-5p mature miRNA |
| Sequence | 31 - AAGUGGAGCAGUGGAUCUCCACU - 53 |
| Evidence | not_experimental |
Mature dpu-miR-1175-3p
| Accession | MIMAT0076034 |
| Description | Daphnia pulex dpu-miR-1175-3p mature miRNA |
| Sequence | 73 - UGAGAUUCAACUACUCCAACUUCU - 96 |
| Evidence | not_experimental |
References
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