Accession
MI0049005
Description
Daphnia pulex
dpu-mir-279c precursor miRNA
Sequence
aauuccauggcgaagguugggcgcucucuaGGUGGGUCUGUUUCUAGUGCAUGuguuuucucagcgcgucauucaUGACUAGAUCCAUACUCAUCUAaagggacccagccauucuacaauuuaaauu
.......((..((((((((((..((((.(((((((((.((..((((((.((((....................))))))))))..)).))))))))).)))).))))))).)))..)).........
.......((..((((((((((..((((.(((((((((.((..((((((.((((....................))))))))))..)).))))))))).)))).))))))).)))..)).........
Structure
--aauucca gc - cg c C UU G uguuuucuc
ug gaa gguuggg cucu uaGGUGGGU UG UCUAGU CAUG a
|| ||| ||||||| |||| ||||||||| || |||||| ||||
ac cuu ccgaccc ggga AUCUACUCA AC AGAUCA GUac g
uuaaauuua au a -a a U CU - uuacugcgc
Annotation confidence
Not enough data
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Genome context
DAPPUscaffold_43: 177501-177567 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from dpu-mir-279c
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature dpu-miR-279c-5p
| Accession | MIMAT0076041 |
| Description | Daphnia pulex dpu-miR-279c-5p mature miRNA |
| Sequence | 31 - GGUGGGUCUGUUUCUAGUGCAUG - 53 |
| Evidence | not_experimental |
Mature dpu-miR-279c-3p
| Accession | MIMAT0076040 |
| Description | Daphnia pulex dpu-miR-279c-3p mature miRNA |
| Sequence | 76 - UGACUAGAUCCAUACUCAUCUA - 97 |
| Evidence | not_experimental |
References
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