miRBase entry: dpu-mir-13523

Stem-loop dpu-mir-13523


Accession
MI0049007
Description
Daphnia pulex dpu-mir-13523 precursor miRNA


Sequence


agucgacucaaaacucggucggauuucgucGAUGAGUGGGGAUCGUUAGUCGCGuugaaauuuccucauguucgUGACUAGAUCUGACACUCGUCCAcgacgucaaccaaaaaucaccccaugugag
...(((((........)))))(((.((((.((((((((.(((((..((((((((..................)))))))))))))..)))))))).)))).))).........((((.....)))).

Structure
--agucgacucaaaacucggucg   u    c        -G     GU        uugaaauu 
                       gau ucgu GAUGAGUG  GGAUC  UAGUCGCG        u
                       ||| |||| ||||||||  |||||  ||||||||         
                       cug agcA CUGCUCAC  UCUAG  AUCAGUgc        c
gaguguaccccacuaaaaaccaa   c    C        AG     --        uuguacuc 


Annotation confidence Not enough data
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Genome context
DAPPUscaffold_32: 69703-69769 []
Clustered miRNAs
4 other miRNAs are < 10 kb from dpu-mir-13523
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dpu-miR-13523-5p

Accession MIMAT0076045
Description Daphnia pulex dpu-miR-13523-5p mature miRNA
Sequence 31 - GAUGAGUGGGGAUCGUUAGUCGCG - 54
Evidence not_experimental

Mature dpu-miR-13523-3p

Accession MIMAT0076044
Description Daphnia pulex dpu-miR-13523-3p mature miRNA
Sequence 75 - UGACUAGAUCUGACACUCGUCCA - 97
Evidence not_experimental

References