Stem-loop dpu-mir-87-3

Accession

MI0049015

Description

Daphnia pulex dpu-mir-87-3 precursor miRNA

Sequence

gugugccucgacguuucacguccgccugccGGGCCUGAUCCUUUGCUCAACCUgugaucguaaaccuuguauuacccuccuuugcgggaggaggugagcaaaguuucaggugcgucagucggaucgucuuucucaccgcacaauu
.(((((...((.(....(((((((.(((.((.((((((..(((((((((.((((((((((.......)).)))))((((((....))))))))))))))))))..)))))).)).))).)))).)))....)))...)))))...

Structure

--g     cuc  c uuuc   -    c   c  G      UC         A   ----------------     -  ua 
   ugugc   ga g    acg uccg cug cG GCCUGA  CUUUGCUCA CCU                gugau cg  a
   |||||   || |    ||| |||| ||| || ||||||  ||||||||| |||                ||||| ||  a
   acacg   cu c    ugc aggc gac gc uggacu  gaaacgagu gga                cauua gu  c
uua     cca  - uuuc   u    u   u  g      uu         -   ggagggcguuuccucc     u  uc 

Annotation confidence Not enough data

Genome context

DAPPUscaffold_1: 2190896-2190980 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from dpu-mir-87-3

Mature dpu-miR-87-3-5p

• Accession: MIMAT0076059
• Description: Daphnia pulex dpu-miR-87-3-5p mature miRNA
• Sequence: 31 - GGGCCUGAUCCUUUGCUCAACCU - 53
• Evidence: not_experimental

References