Accession
MI0049024
Description
Daphnia pulex
dpu-mir-2a precursor miRNA
Sequence
gcucauuuucaaucgccgaccgauuucgggCCGUCAGAGUCGACUGCGAAAUGcuaucgaugcgaugaaguuuccgcgcgaaauuucaaaagucaUAUCACAGCCAGCUUUGACGAGCcggauaucgagucucauucaucuuucgucc
.................(((((((.((.((((((((((((.(.(((.((.(((((((((...))))((((((((.....))))))))...)).))).)).))).).))))))))).))).)).)))).))).................
.................(((((((.((.((((((((((((.(.(((.((.(((((((((...))))((((((((.....))))))))...)).))).)).))).).))))))))).))).)).)))).))).................
Structure
gcucauuuucaaucgcc - u g - C A C A - aucgaugcgau c
gac cgau uc ggC CGUCAGAGU G CUG GA AUG cu gaaguuuc g
||| |||| || ||| ||||||||| | ||| || ||| || |||||||| c
cug gcua ag cCG GCAGUUUCG C GAC CU Uac ga cuuuaaag g
ccugcuuucuacuuacu a u g A A C A A u --------aaa c
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
DAPPUscaffold_80: 240557-240644 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from dpu-mir-2a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature dpu-miR-2a-5p
| Accession | MIMAT0076077 |
| Description | Daphnia pulex dpu-miR-2a-5p mature miRNA |
| Sequence | 31 - CCGUCAGAGUCGACUGCGAAAUG - 53 |
| Evidence | not_experimental |
Mature dpu-miR-2a-3p
| Accession | MIMAT0076076 |
| Description | Daphnia pulex dpu-miR-2a-3p mature miRNA |
| Sequence | 96 - UAUCACAGCCAGCUUUGACGAGC - 118 |
| Evidence | not_experimental |
References
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