miRBase entry: dsi-mir-998

Stem-loop dsi-mir-998


Accession
MI0049114
Description
Drosophila simulans dsi-mir-998 precursor miRNA


Sequence


caaucguccucgugucaaauucauuuuggaACUGAAUUCUCGUGGGUCUGCACUGACAACACUGACCGCUCCAgggccaauuguucauuuugaaauugaaauucugUAGCACCAUGAGAUUCAGCUCuggcgugaauuucaaacaugcauccacaac
..........(((((.((((((((.(((((.((((((.((((((((((......)))..........(((.(((((.(((((...........)))))...))))).))).))))))))))))).))))).))))))))...)))))..........

Structure
caaucguccu     --c        u     A      U       ------------------------------------------------------   UG 
          cgugu   aaauucau uugga CUGAAU CUCGUGG                                                      GUC  C
          |||||   |||||||| ||||| |||||| |||||||                                                      |||   
          guaca   uuuaagug gguCU GACUUA GAGUACC                                                      CAG  A
caacaccuac     aac        c     C      -       ACGAUgucuuaaaguuaaaguuuuacuuguuaaccgggACCUCGCCAGUCACAA   UC 


Annotation confidence Not enough data
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Genome context
ref|NT_479536.1|: 3864943-3865099 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from dsi-mir-998
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dsi-miR-998-5p

Accession MIMAT0076255
Description Drosophila simulans dsi-miR-998-5p mature miRNA
Sequence 31 - ACUGAAUUCUCGUGGGUCUGCACUGACAACACUGACCGCUCCA - 73
Evidence not_experimental

Mature dsi-miR-998-3p

Accession MIMAT0076254
Description Drosophila simulans dsi-miR-998-3p mature miRNA
Sequence 107 - UAGCACCAUGAGAUUCAGCUC - 127
Evidence not_experimental

References