Stem-loop isc-mir-46

Accession

MI0049121

Description

Ixodes scapularis isc-mir-46 precursor miRNA

Sequence

aagcgaccaggcgaggcggccugcucccgaAAGAGAGCAAUCCGUGGACAGUguguauguccgaaauggaacUGUCAUGGAGUCGCUCUCUUUCgggcggggcucgcgguacgcuagcgaaaaa
.(((((((..(((((.(..(((((..((((((((((((..((((((.(((((.......(((.....))))))))))))))...)))))))))))))))))))))))))).)))).........

Structure

--------a    -   ag     g gg     uc            -AA      G     guguaug   g 
         agcg acc  gcgag c  ccugc  ccgaAAGAGAGC   UCCGUG ACAGU       ucc a
         |||| |||  ||||| |  |||||  ||||||||||||   |||||| |||||       ||| a
         ucgc ugg  cgcuc g  gggcg  ggCUUUCUCUCG   AGGUAC UGUca       agg a
aaaaagcga    a   --     - --     --            CUG      -     -------   u 

Annotation confidence Not enough data

Genome context

ref|NW_024609835.1|: 168853349-168853472 [+]

Mature isc-miR-46-5p

• Accession: MIMAT0076268
• Description: Ixodes scapularis isc-miR-46-5p mature miRNA
• Sequence: 31 - AAGAGAGCAAUCCGUGGACAGU - 52
• Evidence: not_experimental

Mature isc-miR-46-3p

• Accession: MIMAT0076269
• Description: Ixodes scapularis isc-miR-46-3p mature miRNA
• Sequence: 73 - UGUCAUGGAGUCGCUCUCUUUC - 94
• Evidence: not_experimental

References