miRBase entry: xbo-mir-13563

Stem-loop xbo-mir-13563


Accession
MI0049157
Description
Xenoturbella bocki xbo-mir-13563 precursor miRNA


Sequence


gugaugcucuguggucgacgugugaugcucUGGGGUUUCGAAGGGUCUUAACgugaaauugcgagcgUAAUGCCCUGUUAAACCCCACAcugucacaucaaccaaucaacgcuggauaa
(((.((.....((((.((..(((((((...((((((((...(((((.(((.(((..........)))))).)))))...))))))))...))))))))).))))..)).))).......

Structure
-------   a  cucug    c  cg       cuc        CGA     C   A   gaaa 
       gug ug     uggu ga  ugugaug   UGGGGUUU   AGGGU UUA Cgu    u
       ||| ||     |||| ||  |||||||   ||||||||   ||||| ||| |||     
       cgc ac     acca cu  acacugu   ACCCCAAA   UCCCG AAU gcg    u
aauaggu   a  ---ua    a  --       cAC        UUG     U   -   agcg 


Annotation confidence Not enough data
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Genome context
scaffold565: 15785-15843 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from xbo-mir-13563
Name Accession Chromosome Start End Strand Confidence




Database links

Mature xbo-miR-13563-5p

Accession MIMAT0076341
Description Xenoturbella bocki xbo-miR-13563-5p mature miRNA
Sequence 31 - UGGGGUUUCGAAGGGUCUUAAC - 52
Evidence not_experimental

Mature xbo-miR-13563-3p

Accession MIMAT0076340
Description Xenoturbella bocki xbo-miR-13563-3p mature miRNA
Sequence 68 - UAAUGCCCUGUUAAACCCCACA - 89
Evidence not_experimental

References