miRBase entry: xbo-mir-13564

Stem-loop xbo-mir-13564


Accession
MI0049158
Description
Xenoturbella bocki xbo-mir-13564 precursor miRNA


Sequence


ccaguagaguuauauucgccacugucgguuCAAGAUUUUUAAGGCCAGUGGAguuucucagccacUACUGGCCUGUAAAAUCUUUAAcaaacuguugguuaaaucaacgaagccagc
.((((.((((...))))...))))...(((.((((((((..((((((((((.(((....)))..))))))))))..)))))))).))).....(((((((..........)))))))

Structure
--ccaguagaguuauauucgccacugucg   C        UA          -A   u 
                             guu AAGAUUUU  AGGCCAGUGG  guu c
                             ||| ||||||||  ||||||||||  |||  
                             cAA UUCUAAAA  UCCGGUCAUc  cga u
cgaccgaagcaacuaaauugguugucaaa   U        UG          ac   c 


Annotation confidence Not enough data
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Genome context
scaffold565: 13743-13799 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from xbo-mir-13564
Name Accession Chromosome Start End Strand Confidence




Database links

Mature xbo-miR-13564-5p

Accession MIMAT0076342
Description Xenoturbella bocki xbo-miR-13564-5p mature miRNA
Sequence 31 - CAAGAUUUUUAAGGCCAGUGGA - 52
Evidence not_experimental

Mature xbo-miR-13564-3p

Accession MIMAT0076343
Description Xenoturbella bocki xbo-miR-13564-3p mature miRNA
Sequence 66 - UACUGGCCUGUAAAAUCUUUAA - 87
Evidence not_experimental

References