miRBase entry: dan-mir-996

Stem-loop dan-mir-996


Accession
MI0049234
Description
Drosophila ananassae dan-mir-996 precursor miRNA


Sequence


uuggggucuuuuucugacucuauuuugucgGCGAACAUGGAUCUAGUGCACGguguuucaugauuaaguucgUGACUAGAUUUCAUGCUCGUCUauuaaguugggucagcacaccaaagagucg
...((.(((((..(((((((.((((.((.(((((.((((((((((((.(((((................))))))))))).)))))).))))).)).)))).)))))))......))))).)).

Structure
uug  g     ----uu       u    u  c     A      -      G     uguuuca 
   gg ucuuu      cugacuc auuu gu gGCGA CAUGGA UCUAGU CACGg       u
   || |||||      ||||||| |||| || ||||| |||||| |||||| |||||        
   cu agaaa      gacuggg ugaa ua CUGCU GUACUU AGAUCA GUgcu       g
--g  g     ccacac       u    u  U     C      U      -     ugaauua 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
ref|NW_001939291.1|: 14198951-14199074 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from dan-mir-996
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dan-miR-996-5p

Accession MIMAT0076495
Description Drosophila ananassae dan-miR-996-5p mature miRNA
Sequence 31 - GCGAACAUGGAUCUAGUGCACG - 52
Evidence not_experimental

Mature dan-miR-996-3p

Accession MIMAT0076494
Description Drosophila ananassae dan-miR-996-3p mature miRNA
Sequence 73 - UGACUAGAUUUCAUGCUCGUCU - 94
Evidence not_experimental

References