miRBase entry: dan-mir-998

Stem-loop dan-mir-998


Accession
MI0049243
Description
Drosophila ananassae dan-mir-998 precursor miRNA


Sequence


cgucuccucucgugucaaauucauuuuggaACUGAAUUCUCGUGGGUCUGCAcugacaacacugaccugcugcugcugcugcucuccaguuuggccaauuuuguuaauuuugaaauugaaauuuugUAGCACCAUGAGAUUCAGCUCuggcgugaauuucaaacaugcauccaccaa
..........(((((.((((((((.(((((.((((((.(((((((..(((((....(((.((((....((.((....)).))....)))))))..((((((((.......))))))))......)))))..))))))))))))).))))).))))))))...)))))..........

Structure
cgucuccucu     --c        u     A      U       GU     ---------------------------cuga   c    accu  u  u 
          cgugu   aaauucau uugga CUGAAU CUCGUGG  CUGCA                               caa acug    gc gc g
          |||||   |||||||| ||||| |||||| |||||||  |||||                               ||| ||||    || ||  
          guaca   uuuaagug gguCU GACUUA GAGUACC  GAUgu                               guu ugac    cg cg c
aaccaccuac     aac        c     C      -       AC     uuuaaaguuaaaguuuuaauuguuuuaaccg   -    cucu  u  u 


Annotation confidence Not enough data
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Genome context
ref|NW_001939291.1|: 5676196-5676372 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from dan-mir-998
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dan-miR-998-5p

Accession MIMAT0076513
Description Drosophila ananassae dan-miR-998-5p mature miRNA
Sequence 31 - ACUGAAUUCUCGUGGGUCUGCA - 52
Evidence not_experimental

Mature dan-miR-998-3p

Accession MIMAT0076512
Description Drosophila ananassae dan-miR-998-3p mature miRNA
Sequence 127 - UAGCACCAUGAGAUUCAGCUC - 147
Evidence not_experimental

References