miRBase entry: hme-mir-9c

Stem-loop hme-mir-9c


Accession
MI0049349
Description
Heliconius melpomene hme-mir-9c precursor miRNA


Sequence


uuucuuuucagcauauuucacuuuucguguAUUUGGUGAUUCAGCUUAUGAcguuacaauauacguuAUAAAGCUGUUUCACUAAAUGUacgcguagugaaauucaacaaaugguguaa
........((.(((((((((((...((((((((((((((..(((((((((((((........))))))).))))))..))))))))))))))...)))))))).......))).))...

Structure
uuucuuuu  g   -------        uuu              UU      -       uac 
        ca cau       auuucacu   cguguAUUUGGUGA  CAGCUU AUGAcgu   a
        || |||       ||||||||   ||||||||||||||  |||||| |||||||    
        gu gua       uaaaguga   gcaUGUAAAUCACU  GUCGAA UAuugca   a
-----aau  g   aacaacu        ugc              UU      A       uau 


Annotation confidence Not enough data
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Genome context
HE671859: 114241-114299 []
Clustered miRNAs
14 other miRNAs are < 10 kb from hme-mir-9c
Name Accession Chromosome Start End Strand Confidence




Database links

Mature hme-miR-9c-5p

Accession MIMAT0076714
Description Heliconius melpomene hme-miR-9c-5p mature miRNA
Sequence 31 - AUUUGGUGAUUCAGCUUAUGA - 51
Evidence not_experimental

Mature hme-miR-9c-3p

Accession MIMAT0076713
Description Heliconius melpomene hme-miR-9c-3p mature miRNA
Sequence 68 - AUAAAGCUGUUUCACUAAAUGU - 89
Evidence not_experimental

References